Microbial ecology of the oceans / [edited by] David L. Kirchman.
"* New edition of best-selling book in this field, thoroughly revised to provide most current knowledge on broadest possible range of topics. ; * Dr. Kirchman is an internationally recognized top authority in ocean ecology and ecosystem microbiology. ; * Contributors are the leading experts in...
Saved in:
| Other Authors: | |
|---|---|
| Format: | Book |
| Language: | English |
| Published: |
Hoboken, N.J. :
Wiley-Blackwell,
[2008]
|
| Edition: | Second edition, Thoroughly revised. |
| Subjects: | |
| Online Access: | Contributor biographical information |
MARC
| LEADER | 00000cam a22000004i 4500 | ||
|---|---|---|---|
| 005 | 20221101222956.0 | ||
| 008 | 080117s2008 njuaf b 001 0 eng d | ||
| 010 | |a 2007051389 | ||
| 011 | |a BIB MATCHES WORLDCAT | ||
| 020 | |a 047004344X |q pbk. | ||
| 020 | |a 9780470043448 |q pbk. | ||
| 035 | |a (ATU)b11303347 | ||
| 035 | |a (OCoLC)185021531 | ||
| 040 | |a DLC |b eng |e rda |c DLC |d BAKER |d YDXCP |d UKM |d BTCTA |d C#P |d ATU | ||
| 050 | 0 | 0 | |a QR106 |b .M53 2008 |
| 082 | 0 | 0 | |a 579.177 |2 22 |
| 245 | 0 | 0 | |a Microbial ecology of the oceans / |c [edited by] David L. Kirchman. |
| 250 | |a Second edition, Thoroughly revised. | ||
| 264 | 1 | |a Hoboken, N.J. : |b Wiley-Blackwell, |c [2008] | |
| 264 | 4 | |c ©2008 | |
| 300 | |a xviii, 593 pages, 3 unnumbered pages of plates : |b illustrations (some colour) ; |c 25 cm | ||
| 336 | |a text |b txt |2 rdacontent | ||
| 337 | |a unmediated |b n |2 rdamedia | ||
| 338 | |a volume |b nc |2 rdacarrier | ||
| 504 | |a Includes bibliographical references and index. | ||
| 505 | 0 | 0 | |g 1. |t Introduction and Overview / |r David L. Kirchman -- |t Eukaryotic Phytoplankton and Cyanobacteria -- |t Photoheterotrophic Bacteria -- |t Dissolved Organic Material -- |t Heterotrophic Bacteria -- |t Marine Archaea -- |t Heterotrophic Protists -- |t Nanoflagellates (2 - 20 um) -- |t Microzooplanktonic Protists (20 - 200 um) -- |t Dinoflagellates -- |t Marine Fungi -- |t Marine Viruses -- |t N2 Fixers -- |t Nitrifiers and Other Chemolithotrophs -- |t Denitrifiers -- |g 2. |t Understanding Roles of Microbes in Marine Pelagic Food Webs: A Brief History / |r Evelyn Sherr and Barry Sherr -- |t Pre-1950s: The Early Years -- |t Improvement in Methods -- |t Bacterial Abundance -- |t Bacterial Activity -- |t Marine Heterotrophic Protists -- |t The "Microbial Loop" -- |g 3. |t Bacterial and Archaeal Community Structure and Its Patterns / |r Jed A. Fuhrman and Ake Hagstrom -- |t Major Groups of Prokaryotes in Seawater -- |t The Roseobacter Clade of Marine Alphaproteobacteria -- |t Gammaproteobacteria -- |t Bacteroidetes -- |t Cyanobacteria -- |t SAR11 Cluster -- |t Not-Yet-Cultured Bacteria -- |t Marine Gammaproteobacterial Clusters -- |t Actinobacteria -- |t SAR116 Cluster -- |t Sar202 -- |t Marine Group A -- |t Marine Group B -- |t Betaproteobacteria -- |t Marine Archaea -- |t Bacterioplankton Diversity -- |t Species Concept -- |t Microdiversity -- |t Components of Diversity: Richness and Evenness -- |t Community Structure: Description and Factors -- |t Bottom-Up Control -- |t Sideways Control -- |t Top-Down Control -- |t Temporal Variation (Days to Seasonal) -- |t Short-Term Variation -- |t Seasonal Variation -- |t Spatial Variation -- |t Microscale Patterns -- |t Global Distribution -- |t Latitudinal Gradient and Degree of Endemism -- |t Patchiness and Large Eddies -- |g 4. |t Genomics and Metagenomics of Marine Prokaryotes / |r Mary Ann Moran -- |t The Basics of Prokaryotic Genomics -- |t Genome Sequence and Assembly -- |t Finding Genes -- |t Finding Operons -- |t Functional Annotation -- |t Tame or Wild? Pure-Culture Genomics Versus Metagenomics -- |t Genomics in Marine Microbial Ecology -- |t The Ecology of Genome Composition -- |t Reverse Biogeochemistry: Discovery of New Ecological Processes -- |t Environmental Reductionism: New Details About Recognized Processes -- |t Comparative Genomics and Metagenomics -- |t Future Directions -- |g 5. |t Photoheterotrophic Marine Prokaryotes / |r Oded Beja and Marcelino T. Suzuki -- |t Facultative Photoheterotrophy by Unicellular Cyanobacteria -- |t Cyanobacteria as Facultative Heterotrophs -- |t Uptake of Urea and DMSP -- |t Uptake of Nucleosides and Amino Acids -- |t Field Studies Using Light and Dark Incubations -- |t Implications of Facultative Photoheterotrophy by Cyanobacteria -- |t Marine AAnP Bacteria: Habitats and Diversity -- |t Rediscovery of the Marine AAnP Bacteria -- |t Diversity of AAnP Bacteria -- |t Physiology of AAnP Bacteria -- |t AAnP Bacterial Abundance and Ecological Significance -- |t Proteorhodopsin-Containing Prokaryotes -- |t Proteorhodopsin Genotypes and Taxonomic Distributions -- |t Proteorhodopsin Spectral Tuning -- |t Proteorhodopsin-Containing Prokaryotes: Abundance and Activity -- |t Proteorhodopsin-Containing Prokaryotes: Ecological Significance -- |g 6. |t Ecology and Diversity of Picoeukaryotes / |r Alexandra Z. Worden and Fabrice Not -- |t Functional Roles, Classification, and Biological Traits -- |t Photoautotrophs -- |t Heterotrophs and Alternative Lifestyles -- |t Environmental Diversity and Molecular Phylogenetics -- |t Diversity of Uncultured Populations -- |t Methodological Issues for envPCR Studies -- |t Distribution, Abundance, and Activities -- |t Methods for Quantifying Mixed Assemblages -- |t Distribution, Abundance, and Activity of Mixed Picophytoplankton Assemblages -- |t Quantifying Specific Picoeukaryote Populations -- |t Methodological Challenges to Quantifying Specific Populations and Resolving Dynamics -- |t Mortality, Contributions to Microbial Food Webs, and Microbial Interactions -- |t Genomic Approaches to Picoeukaryote Ecology -- |t Integration of Picoeukaryotes to the Microbial Food Web: Research Directions -- |g 7. |t Organic Matter - Bacteria Interactions in Seawater / |r Toshi Nagata -- |t Organic Matter Inventory and Fluxes -- |t DOM - Bacteria Interactions -- |t Labile Low-Molecular Weight (LMW) DOM -- |t Extracellular Hydrolytic Enzymes -- |t Polymeric DOM - Protein as a Model -- |t Refractory DOM -- |t POM - Bacteria Interactions -- |t POM Continuum -- |t POM Fluxes -- |t POM - Mineral Interactions -- |t Bacterial Community Structure and Utilization of Organic Matter -- |t Future Challenges -- |g 8. |t Physiological Structure and Single-Cell Activity in Marine Bacterioplankton / |r Paul A. del Giorgio and Josep M. Gasol -- |t Distribution of Physiological States in Bacterioplankton Assemblages -- |t The Concept of "Physiological Structure" of Bacterioplankton Assemblages -- |t Starvation, Dormancy, and Viability in Marine Bacterioplankton -- |t Describing the Physiological Structure of Bacterioplankton -- |t Single-Cell Properties and Methodological Approaches -- |t Operational Categories of Single-Cell Activity -- |t Regulation of Physiological Structure of Marine Bacterioplankton -- |t Factors Influencing Physiological State of Bacterial Cells in Marine Ecosystems -- |t Factors Influencing Loss and Persistence of Physiological Fractions -- |t Distribution of Single-Cell Characteristics in Marine Bacterioplankton Assemblages -- |t Distribution of Single-Cell Activity and Physiological States in Marine Bacterioplankton -- |t Simultaneous Determination of Several Aspects of Single-Cell Activity and Physiology -- |t Patterns in Distribution of Single-Cell Activity and Physiology Along Marine Gradients -- |t Distribution of Activity and Growth Among Bacterial Size Classes -- |t Distribution of Activity Across and Within Major Phylogenetic Groups -- |t Dynamics of Single-Cell Activity and Physiological States -- |t Ecological Implications of Patterns in Bacterioplankton Single-Cell Activity -- |t Community Versus Individual Cell Growth and Metabolic Rates -- |t Linking the Distribution of Single-Cell Parameters and the Bulk Assemblage Response -- |t Ecological Role of Different Physiological Fractions -- |
| 505 | 0 | 0 | |g 9. |t Heterotrophic Bacterial Respiration / |r Carol Robinson -- |t Measurement of Bacterial Respiration and Production -- |t Routine Measurement Techniques for Bacterial Respiration and Their Limitations -- |t Routine Measurement Techniques for Bacterial Production and Their Limitations -- |t Magnitude and Variability of Bacterial Respiration -- |t Temporal Variability -- |t Spatial Variability -- |t Relationship Between Bacterial Respiration and Environmental and Ecological Factors -- |t Bacterial Respiration as a Proportion of Community Respiration -- |t Predicting Bacterial Respiration -- |t Comparison Between Measurements and Predictions of Bacterial Respiration -- |t Magnitude of Bacterial Respiration in Relation to Primary Production -- |t Bacterial Respiration in a Changing Environment -- |g 10. |t Resource Control of Bacterial Dynamics in the Sea / |r Matthew J. Church -- |t Growth in the Sea -- |t Growth and Nutrient Uptake Kinetics -- |t Approaches to Understanding Resource Control of Growth -- |t Comparative Approaches -- |t Experimental Approaches for Defining Limitation of Bacterial Growth -- |t Limitation by Dissolved Organic Matter -- |t Bacterial Growth on Bulk DOM Pools -- |t Limitation by Specific DOM Compounds -- |t Limitation by Inorganic Nutrients -- |t Nitrogen -- |t Phosphorus -- |t Trace Nutrients -- |t Temperature - DOM Interactions -- |t Light -- |t Resource Control of Specific Bacterial Populations in the Sea -- |g 11. |t Protistan Grazing on Marine Bacterioplankton / |r Klaus Jurgens and Ramon Massana -- |t New Insights into Phylogenetic Organization -- |t Functional Size Classes of Protists -- |t Natural Assemblages of Marine Heterotrophic Nanoflagellates -- |t Functional Ecology of Bacterivorous Flagellates -- |t Living in a Dilute Environment -- |t Using Culture Experiments to Infer the Ecological Role of HNF -- |t Impact of Protistan Bacterivory on Marine Bacterioplankton -- |t Search for the Perfect Method to Quantify Protistan Bacterivory -- |t Rates of Protistan Bacterivory in the Sea -- |t Balance of Bacterial Production and Protistan Grazing -- |t Bottom-Up Versus Top-Down Control of Bacteria and Bacterivorous Protists -- |t Ecological Functions of Bacterial Grazers -- |t Grazing as a Shaping Force of Bacterial Assemblages -- |t Bacterial Cell Size Determines Vulnerability Towards Grazers -- |t Other Antipredator Traits of Prokaryotes -- |t Grazing-Mediated Changes in Bacterial Community Composition -- |t Molecular Tools for Protistan Ecology -- |t Culturing Bias and Molecular Approaches -- |t Global Distribution and Diversity of Marine Protists -- |t Linking Diversity and Function for Uncultured Heterotrophic Flagellates -- |g 12. |t Marine Viruses: Community Dynamics, Diversity and Impact on Microbial Processes / |r Mya Breitbart, Mathias Middelboe, and Forest Rohwer -- |t Viruses and the Marine Microbial Food Web -- |t Direct Counts and Viral Numbers -- |t Viral Production and Decay Rates -- |t Viral Decay and Rates of Production in Pelagic Systems -- |t Measurements of Viral Production in Marine Sediments -- |t General Rates of Viral Production -- |t Role of Viruses in Biogeochemical Cycling -- |t Impact of Viruses on Bacterial Diversity and Community Dynamics -- |t Marine Viral Diversity -- |t Methods for Examining Marine Viral Diversity -- |t Culture-Based Studies of Viral Diversity -- |t The Need for Culture-Independent Methods -- |t Culture-Independent Studies of Viral Diversity Using Transmission Electron Microscopy -- |t Whole-Genome Profiling of Viral Communities Based on Genome Size -- |t Studies of Viral Diversity Using Signature Genes -- |t Metagenomic Studies of Viral Diversity -- |t A Vision for the Future -- |g 13. |t Molecular Ecological Aspects of Nitrogen Fixation in the Marine Environment / |r Jonathan P. Zehr and Hans W. Paerl -- |t Chemistry, Biochemistry, and Genetics of N2 Fixation -- |t Genetics and Enzymology -- |t Evolution of N2 Fixation -- |t Phylogeny of Nitrogenase -- |t Genomics of N2 Fixation -- |t Diversity of N2-Fixing Microorganisms -- |t Regulation in Diazotrophs -- |t Methods for Assessing Diazotroph Diversity, Gene Expression, and N2 Fixation Activity -- |t Ecophysiological Aspects of N2 Fixation -- |t Ecology of Diazotrophs in the Open Ocean -- |t Estuarine and Coastal Waters -- |t Benthic Habitats, Including Microbial Mats and Reefs -- |t Deep Water and Hydrothermal Vents -- |g 14. |t Nitrogen Cycling in Sediments / |r Bo Thamdrup and Tage Dalsgaard -- |t Inputs -- |t Transformations -- |t Microbes and Microbial Processes -- |t Processes Involving Mn and Fe -- |t Nitrogen Budgets -- |t Benthic Budgets -- |t Oceanic Budgets -- |t Summary. |
| 520 | |a "* New edition of best-selling book in this field, thoroughly revised to provide most current knowledge on broadest possible range of topics. ; * Dr. Kirchman is an internationally recognized top authority in ocean ecology and ecosystem microbiology. ; * Contributors are the leading experts in the world for their respective topics. ; * This book continues to be unique in all the literature and fills a void in the rapidly growing fields of marine microbiology and microbial ecology. ; * A selected reading list for each chapter. ~"--Publisher description. | ||
| 588 | |a Machine converted from AACR2 source record. | ||
| 650 | 0 | |a Marine microbiology |9 320419 | |
| 650 | 0 | |a Marine ecology |9 320410 | |
| 650 | 0 | |a Carbon cycle (Biogeochemistry) |9 315006 | |
| 700 | 1 | |a Kirchman, David L., |e editor. |9 1029832 | |
| 856 | 4 | 2 | |3 Contributor biographical information |u http://www.loc.gov/catdir/enhancements/fy0829/2007051389-b.html |
| 907 | |a .b11303347 |b 10-06-19 |c 27-10-15 | ||
| 942 | |c B | ||
| 945 | |a 579.177 MIC |g 1 |i A427176B |j 0 |l cmain |o - |p $113.02 |q - |r - |s - |t 0 |u 7 |v 0 |w 0 |x 1 |y .i12725638 |z 29-10-15 | ||
| 952 | |0 0 |1 0 |4 0 |6 579_177000000000000_MIC |7 0 |9 310086 |a C |b C |c cmain |d 2015-10-29 |g 113.02 |i i12725638 |l 7 |m 0 |o 579.177 MIC |p A427176B |r 2019-03-27 00:00:00 |s 2019-03-14 |t 1 |v 113.02 |w 2021-10-31 |y B | ||
| 998 | |a (3)b |a (3)c |b 06-04-16 |c m |d a |e - |f eng |g nju |h 0 | ||
| 999 | |c 1181718 |d 1181718 | ||